Job Description P19323 Confidence 100.00% Date Thu Jan 5 11:37:18 GMT 2012 Rank 8 Aligned Residues 334 % Identity 11% Template c1mc0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:3',5'-cyclic nucleotide phosphodiesterase 2a; PDBTitle: regulatory segment of mouse 3',5'-cyclic nucleotide phosphodiesterase2 2a, containing the gaf a and gaf b domains Resolution 2.86 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	Q	G	L	F	D	I	T	R	T	L	L	Q	Q	P	D	L	A	S	L	C	E	A	L	S	Q	L	V	K	R	S	A	L	A	D	N	A	A	I	V	L	W	Q	A	Q	T	Q	R	A	S	Y	Y	A	S	R	E	K	D	T	P	I	K	Y	E	D	E	T	V	L	A	H	G	P	V	R	S	I	L	S
Query Conservation
Alig confidence															.																																																	.	.
Template Conservation															.																																																	.	.
Template Sequence		H	D	R	K	I	L	Q	L	C	G	E	L	F	.	D	L	D	A	T	S	L	Q	L	K	V	L	Q	Y	L	Q	Q	E	T	Q	A	T	H	C	C	L	L	L	V	S	E	D	N	L	Q	L	S	C	K	V	I	G	D	K	V	L	G	E	.	.	E	V	S	F	P	L	T	M	G	R	L	G	Q	V	V	E
Template Known Secondary structure												T			.		S	S																S												S	S	S									T	T						.	.						S	S	S	S	S
Template Predicted Secondary structure															.																																																	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		R	P	D	T	L	H	C	S	Y	E	E	F	C	E	T	W	P	Q	L	D	A	G	G	L	Y	P	K	F	G	H	Y	C	L	M	P	L	A	A	E	G	H	I	F	G	G	C	E	F	I	R	.	Y	D	D	R	P	W	S	E	K	E	F	N	R	L	Q	T	F	T	Q	I	V	S	V	V	T	E	Q	I	Q
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		D	K	Q	C	I	Q	L	K	D	L	T	S	D	D	V	Q	Q	L	Q	N	M	L	G	C	E	L	Q	A	M	L	C	V	P	V	I	S	R	A	T	D	Q	V	V	A	L	A	C	A	F	N	K	L	G	G	D	F	F	T	D	E	D	E	H	V	I	Q	H	C	F	H	Y	T	G	T	V	L	T	S	T	L
Template Known Secondary structure								G	G	G	S														S													T	T	T		S											S	S		S	S			S
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	V	V	N	N	V	D	Y	E	L	L	C	R	E	R	D	N	F	R	I	L	V	A	I	T	N	A	V	L	S	R	L	D	M	D	E	L	V	S	E	V	A	K	E	I	H	Y	Y	F	D	I	D	D	I	S	I	V	L	R	S	H	R	K	N	K	L	N	I	Y	S	T	H	Y	L	D	K	Q	H	P
Query Conservation
Alig confidence													.	.	.	.	.	.																																																.	.	.
Template Conservation													.	.	.	.	.	.																																																.	.	.
Template Sequence		A	F	Q	K	E	Q	K	L	K	C	E	.	.	.	.	.	.	C	Q	A	L	L	Q	V	A	K	N	L	F	T	H	L	D	D	V	S	V	L	L	Q	E	I	I	T	E	A	R	N	L	S	N	A	E	I	C	S	V	F	L	L	D	Q	N	E	.	.	.	L	V	A	K	V	F	D	G	G	V	V	D	D
Template Known Secondary structure													.	.	.	.	.	.														T	T	T																		T											S	S	S	.	.	.							T	T
Template Predicted Secondary structure													.	.	.	.	.	.																																																.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.							.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.				.	.	.	.	.	.	.	440	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.
Predicted Secondary structure																																																													.												.
Query SS confidence																																																													.												.
Query Sequence		A	H	E	Q	S	E	V	D	E	A	G	T	L	T	E	R	V	F	K	S	K	E	M	L	L	I	N	L	H	E	R	D	D	L	A	P	Y	E	R	M	L	F	D	T	W	G	N	Q	I	Q	T	L	C	L	L	P	L	M	S	.	G	D	T	M	L	G	V	L	K	L	A	.	Q	C	E	E	K	V	F	T
Query Conservation																																																													.												.
Alig confidence																																																.	.												.												.
Template Conservation																																																.	.
Template Sequence		E	S	Y	E	I	R	I	P	A	D	Q	G	I	A	G	H	V	A	T	T	G	Q	I	L	N	I	P	D	A	Y	A	H	P	L	F	Y	R	G	V	D	D	S	T	G	F	R	.	.	T	R	N	I	L	C	F	P	I	K	N	E	N	Q	E	V	I	G	V	A	E	L	V	N	K	I	N	G	P	W	F	S
Template Known Secondary structure		S	T	T						T	T	S																S		S	T	T		T	T				T	T					T			.	.												T	T	S												T	T	S	S	S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.			.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	N	L	N	L	L	R	Q	I	A	E	R	V	A	I	A	V	D	N	A	L	A	Y	Q	E	I	H	R	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	D	E	D	L	A	T	A	F	S	I	Y	C	G	I	S	I	A	H	S	L	L	Y	K	K	V	N	E	A	Q
Template Known Secondary structure																															T	T
Template Predicted Secondary structure
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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