Job Description P19323 Confidence 98.90% Date Thu Jan 5 11:37:18 GMT 2012 Rank 115 Aligned Residues 216 % Identity 21% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	I	H	R	L	K	E	R	L	V	D	E	N	L	A	L	T	E	Q	L	N	N	V	D	S	E	F	G	E	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	A	Q	S	D	S	T	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	H	N	L	S	G	R	N	N
Query Conservation
Alig confidence																						.	.	.	.	.	.																											.	.
Template Conservation																						.	.	.	.	.	.																											.	.
Template Sequence		E	E	I	R	E	V	K	V	L	E	K	P	W	V	E	K	Y	R	P	Q	.	.	.	.	.	.	R	L	D	D	I	V	G	Q	E	H	I	V	K	R	L	K	H	Y	V	K	T	G	S	M	P	H	.	.	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N
Template Known Secondary structure			T	T					T	T	S	S		G	G	G	T	S				.	.	.	.	.	.	S	G	G	G			S													T	T	T					.	.					S		T	T	S	S	T	T												G	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.																											.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		431	.			.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		R	R	.	.	M	V	K	M	N	C	A	A	M	P	A	G	L	L	E	S	D	L	F	G	H	E	R	G	A	F	T	G	A	S	A	Q	R	I	G	R	F	E	L	A	D	K	S	S	L	F	L	D	E	V	G	D	M	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L	G	S	N
Query Conservation				.	.
Alig confidence				.	.																																.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Sequence		W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I	R	E	K	V	K	E	F	A	R	T	K	P	I	G	G	A	.	.	.	.	.	.	.	.	.	S	F	K	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	F	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	T	S	S													T	T	S			S	S	S		.	.	.	.	.	.	.	.	.	S								T	G	G	G	S															T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	I	Q	T	D	V	R	L	I	A	A	T	N	R	D	L	K	K	M	V	A	D	R	E	F	R	S	D	L	Y	Y	R	L	N	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E	T	L	R	T
Query Conservation
Alig confidence		.	.	.													.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																			.	.	.
Template Conservation		.	.	.													.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		.	.	.	S	S	N	V	R	F	I	L	S	C	N	Y	.	.	.	.	.	.	.	S	S	K	I	I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	.	.	.	.	.	.	.	.	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	E	G	L	E	.	.	.	L	T	E	E	G	L	Q	A
Template Known Secondary structure		.	.	.	T	T	T								S		.	.	.	.	.	.	.	G	G	G	S						T	T											.	.	.	.	.	.	.	.																T			.	.	.
Template Predicted Secondary structure		.	.	.													.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
					138	.	140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170									.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	N	M	E	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T	R
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		I	L	Y	I	A	.	E	G	D	M	R	R	A	I	N	I	L	Q	A	A	A	A	L	D	K
Template Known Secondary structure							.	T	T														T	T		S
Template Predicted Secondary structure							.
Template SS confidence
		197	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions