Job Description P19323 Confidence 99.56% Date Thu Jan 5 11:37:18 GMT 2012 Rank 59 Aligned Residues 273 % Identity 14% Template c1hqcB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:ruvb; PDBTitle: structure of ruvb from thermus thermophilus hb8 Resolution 3.20 Å

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		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.				.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		E	F	G	E	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	A	Q	S	D	S	T	.	.	.	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	H	N	L	S	G	R	N	N	R	R	M	V	K	M	N	C	A	A	M	P	A	G	L	L	E	S	D	L	F	G	H
Query Conservation																														.	.	.
Alig confidence																														.	.	.																						.	.	.
Template Conservation																																																						.	.	.
Template Sequence		T	L	D	E	Y	I	G	Q	E	R	L	K	Q	K	L	R	V	Y	L	E	A	A	K	A	R	K	E	P	L	E	H	L	L	L	F	G	P	P	G	L	G	K	T	T	L	A	H	V	I	A	H	E	.	.	.	L	G	V	N	L	R	V	T	S	G	P	A	I	E	K	P	G	D	L	A	A	I	L	A	N
Template Known Secondary structure		S	T	T	T	S		S																	S	S		S											T	T														.	.	.		T								T	T	T			S										T
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	A	F	T	G	A	S	A	Q	R	I	G	R	F	E	L	A	D	K	S	S	L	F	L	D	E	V	G	D	M	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L	G	S	N	K	I	I	Q	T	D	V	R	L	I	A	A	T	N	R	D	L	K	K	M	V	A	D	R	E
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	D	I	L	F	I	D	E	I	H	R	L	S	R	Q	A	E	E	H	L	Y	P	A	M	E	D	F	V	M	D	I	V	I	G	Q	G	P	A	A	R	T	I	R	L	E	L	P	R	F	T	L	I	G	A	T	T	R	P	G	L
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T						T	T	T	T	S																S						B	S	S	S	S	S		B																S	S		S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.																	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	S	D	L	Y	Y	R	L	N	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E	T	L	R	T	L	S	N	M	E	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T	R
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																												.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		I	T	A	P	L	L	S	R	F	G	I	V	E	H	L	E	Y	Y	T	P	E	E	L	A	Q	G	.	.	.	.	.	.	.	.	.	.	V	M	R	D	A	R	L	L	G	V	R	I	T	E	E	A	A	L	E	I	G	R	R	.	S	R	G	T	M	R	V	A	K	R	L	F	R	R	V	R	D	F	A	Q
Template Known Secondary structure			S		S	T	T	T	T		S																	.	.	.	.	.	.	.	.	.	.							T	T	S			B												.	S		S													T	T	T	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.											.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
					614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	N	V	L	Q	L	S	L	P	D	I	V	L	P	E	P	E	T	P	P	A	A	T	V	V	A	L	E	G	E	D	E	Y	Q	L	I	V	R	V	L	K	E	T	N	G	V	V	A	G	P	K	G	A	A	Q	R	L	G	L	K	R	T	T	L	L	S	R	M	K	R	L
Query Conservation		.	.	.
Alig confidence		.	.	.																									.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		V	A	G	E	E	V	I	T	R	E	R	A	L	E	A	L	A	A	L	G	L	D	E	L	G	L	E	.	.	.	.	.	K	R	D	R	E	I	L	E	V	L	I	L	R	F	G	G	G	P	V	G	L	A	T	L	A	T	A	L	S	E	D	P	G	T	L	E	E	V	H	E	P	Y
Template Known Secondary structure			S	S	S	S		B													T			T	T				.	.	.	.	.														S		S	S											T	T	S									T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.						.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions