Job Description P19323 Confidence 99.12% Date Thu Jan 5 11:37:18 GMT 2012 Rank 92 Aligned Residues 292 % Identity 11% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

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		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.					400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure																																			.	.	.	.																								.
Query SS confidence																																			.	.	.	.																								.
Query Sequence		L	T	E	Q	L	N	N	V	D	S	E	F	G	E	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	A	.	.	.	.	Q	S	D	S	T	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	.	H	N	L	S	G	R	N	N	R	R	M	V	K	M	N	C	A	A	M
Query Conservation																																			.	.	.	.																								.
Alig confidence																																			.	.	.	.																								.
Template Conservation
Template Sequence		V	D	D	S	V	F	S	P	S	Y	V	P	K	R	L	P	H	R	E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	T	A	R	F	V	Y	I	N	G	F	I	Y
Template Known Secondary structure		S		G	G	G	G	S	T	T				S			T	T																		S		B	S	S										T	T	S	S													T	T	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.										.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.
Query Sequence		P	A	G	L	L	E	S	D	L	F	G	H	E	R	G	A	F	T	G	A	S	A	Q	R	I	.	.	.	.	.	.	.	.	.	G	R	F	E	L	A	D	K	S	S	L	F	L	D	E	V	G	D	M	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L	G	S	N	K	I	I	Q
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.
Template Sequence		R	N	F	T	A	I	I	G	E	I	A	R	S	L	N	I	P	F	P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	A	P	D	I	L	S	T	F	I	R	L	G	Q	E	A	D	.	.	.	.	.	.	.	K	L	G	A
Template Known Secondary structure			S													T					S	S																		T	T									T	G	G	G	S												T	T				.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.								.	.	.	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		T	D	V	R	L	I	A	A	T	N	R	D	L	K	K	M	V	A	D	R	E	F	R	S	D	L	Y	Y	R	L	N	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E	T	L	R	T	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																		.	.	.	.																						.	.																					.	.	.	.	.										.	.	.
Template Conservation																		.	.	.	.																						.	.																					.	.	.	.	.
Template Sequence		F	R	I	A	L	V	I	V	G	H	N	D	A	V	L	N	.	.	.	.	N	L	D	P	S	T	R	G	I	M	G	K	Y	V	I	R	F	S	P	Y	T	.	.	K	D	Q	I	F	D	I	L	L	D	R	A	K	A	G	L	A	E	G	S	.	.	.	.	.	Y	S	E	D	I	L	Q	M	I	A	D	I
Template Known Secondary structure		B									S	S	T					.	.	.	.	T	S									T	T									B	.	.																B		T	T	S	.	.	.	.	.	S
Template Predicted Secondary structure																		.	.	.	.																						.	.																					.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.
							590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.				.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
Predicted Secondary structure		.	.	.	.	.																								.	.	.
Query SS confidence		.	.	.	.	.																								.	.	.
Query Sequence		.	.	.	.	.	S	N	M	E	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T	.	.	.	R	G	N	V	L	Q	L	S	L	P	D	I	V	L	P	E	P	E	T	P	P	A	A	T	V	V	A	L	E	G	E	D	E	Y	Q	L	I	V	R	V	L	K	E	T	N	G	V	V	A
Query Conservation		.	.	.	.	.																								.	.	.
Alig confidence		.	.	.	.	.																								.	.	.																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		T	G	A	Q	T	P	L	D	T	N	R	G	D	A	R	L	A	I	D	I	L	Y	R	S	A	Y	A	A	Q	Q	N	G	R	K	H	I	A	P	E	D	V	R	K	S	S	K	E	V	L	F	G	I	S	E	E	V	L	I	G	L	P	L	H	E	K	L	F	L	L	A	I	V	R	S	L	.	.	.	.	.
Template Known Secondary structure			S	B	S	S	T	T		T	T																					T	T		S	S														S										T	S																.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	K	G	A	A	Q	R	L	G	L	K	R	T	T	L	L	S	R	M	K	R	L
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	K	I	S	H	T	P	Y	I	T	F	G	D	A	E	E	S	Y	K	I	V
Template Known Secondary structure		.	.	.					S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions