Return to main results Retrieve Phyre Job Id

Job DescriptionP46890
Confidence84.31%DateThu Jan 5 12:04:38 GMT 2012
Rank172Aligned Residues49
% Identity20%Templated2cfxa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Lrp/AsnC-like transcriptional regulator N-terminal domain
Resolution2.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50...
Predicted Secondary structure 












Query SS confidence 




















































Query Sequence  MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWL
Query Conservation        
     
            
 


  
 

 

    
  
   


Alig confidence 














....

































Template Conservation 
 

  
  

  
 .... 
 
 
  


  



  

  

  
   


Template Sequence  MKLDQIDLNIIEELK. . . . KDSRLSMRELGRKIKLSPPSVTERVRQLESFGII
Template Known Secondary structure 



....
S


T

TTSS
Template Predicted Secondary structure 



....











Template SS confidence 




















































   1........10..... ....20.........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions