Return to main results Retrieve Phyre Job Id

Job DescriptionP46890
Confidence96.79%DateThu Jan 5 12:04:38 GMT 2012
Rank26Aligned Residues64
% Identity23%Templated1sfxa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.......
Predicted Secondary structure 
















Query SS confidence 
































































Query Sequence  TVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALET
Query Conservation     
 


  
 

 

    
  
   


 
 
  


  
 
                    
Alig confidence 




































.


























Template Conservation    
  


    
    

  
  
   


 
    .  
   

      
 
  
   
 
 
Template Sequence  GXRVSEIARELDLSARFVRDRLKVLLKRGFVRREIVE. KGWVGYIYSAEKPEKVLKEFKSSILGE
Template Known Secondary structure 
B
T

TTS.SSS

Template Predicted Secondary structure 












.







Template SS confidence 
































































   33......40.........50.........60......... 70.........80.........90......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions