Job Description P46890 Confidence 76.75% Date Thu Jan 5 12:04:38 GMT 2012 Rank 199 Aligned Residues 72 % Identity 11% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		23	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																																																						.	.	.
Query SS confidence													.	.	.	.																																																						.	.	.
Query Sequence		T	V	T	V	S	E	L	A	E	R	C	.	.	.	.	F	C	S	E	R	H	V	R	T	L	L	R	Q	A	Q	E	A	G	W	L	E	W	Q	A	Q	S	G	R	G	K	R	G	Q	L	R	F	L	V	T	P	E	S	L	R	N	A	M	M	E	Q	A	L	E	.	.	.	T	G	K	Q	Q	D	V	L	E
Query Conservation													.	.	.	.																																																						.	.	.
Alig confidence													.	.	.	.																									.	.	.																											.	.	.
Template Conservation																																									.	.	.
Template Sequence		S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	.	.	.	S	E	N	I	Y	F	Y	S	S	N	I	K	E	D	D	I	K	X	K	T	A	K	T	F	L	N	K	L	Y	G	G	D	X	K	S	L	V	L
Template Known Secondary structure		S												T	T	S																	T	T	S						.	.	.		T	T								S																			T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		96	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		101	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions