Return to main results Retrieve Phyre Job Id

Job DescriptionP46890
Confidence46.07%DateThu Jan 5 12:04:38 GMT 2012
Rank264Aligned Residues40
% Identity13%Templated1ixca1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LysR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50
Predicted Secondary structure 








Query SS confidence 














































Query Sequence  LNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEA
Query Conservation     
     
            
 


  
 

 

    
  
   
Alig confidence 













.......

























Template Conservation 
  
  
  
   
.......
 
 

  
 






  
  

  
Template Sequence  FRQLKYFIAVAEAG. . . . . . . NXAAAAKRLHVSQPPITRQXQALEAD
Template Known Secondary structure  S.......ST

Template Predicted Secondary structure 
.......



Template SS confidence 














































   3......10...... ...20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions