 |
Job Description | P46890 | Confidence | 21.71% | Date | Thu Jan 5 12:04:38 GMT 2012 |
Rank | 357 | Aligned Residues | 42 |
% Identity | 12% | Template | c3t1bB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:transcriptional regulator, lysr family; |
PDBTitle: crystal structure of the full-length aphb n100e variant
|
Resolution | 2.70 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | L | L | N | R | L | N | Q | Y | Q | R | L | W | Q | P | S | A | G | K | P | Q | T | V | T | V | S | E | L | A | E | R | C | F | C | S | E | R | H | V | R | T | L | L | R | Q | A | Q | E | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |
|
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   | . |
|   |   |
|   |   |
|   |   |
|   |   |   |
| . | . | . | . | . | . | . |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
Template Sequence |   |
M | K | . |
L | D | D | L | N | L | F | R | L | V | V | E | N | G | . |
. |
. |
. |
. |
. |
. |
S | Y | T | S | T | S | K | K | T | M | I | P | V | A | T | I | T | R | R | I | Q | A | L | E | D | S |
Template Known Secondary structure |   |
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  | S | . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | |
. | . | . | . | . | . | . | 10 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|