Return to main results Retrieve Phyre Job Id

Job DescriptionP46890
Confidence21.71%DateThu Jan 5 12:04:38 GMT 2012
Rank357Aligned Residues42
% Identity12%Templatec3t1bB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: crystal structure of the full-length aphb n100e variant
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50
Predicted Secondary structure 










Query SS confidence 

















































Query Sequence  MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEA
Query Conservation        
     
            
 


  
 

 

    
  
   
Alig confidence 

.













.......

























Template Conservation 
 .
  
  
  
   
.......
 
 

  
 


 


  
  

  
Template Sequence  MK. LDDLNLFRLVVENG. . . . . . . SYTSTSKKTMIPVATITRRIQALEDS
Template Known Secondary structure 

.S.......S


Template Predicted Secondary structure 

.
.......



Template SS confidence 

















































   1. .......10...... ...20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions