Job Description P46890 Confidence 100.00% Date Thu Jan 5 12:04:38 GMT 2012 Rank 4 Aligned Residues 442 % Identity 15% Template c3m8uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:heme-binding protein a; PDBTitle: crystal structure of glutathione-binding protein a (gbpa) from2 haemophilus parasuis sh0165 in complex with glutathione disulfide3 (gssg) Resolution 1.85 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		P	T	L	R	I	P	Y	Y	R	P	L	E	P	L	Q	P	G	F	L	P	G	R	A	E	Q	H	.	L	A	G	Q	I	F	S	G	L	T	R	F	D	N	N	T	Q	R	P	I	G	D	L	A	H	H	W	E	T	S	T	D	G	L	R	W	D	F	Y	L	R	S	T	L	H	W	H	N	G	D	A	V	K
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		K	T	F	I	N	C	V	S	R	S	P	T	G	F	S	P	A	L	V	M	D	G	I	S	Y	N	A	S	S	Q	Q	V	Y	N	R	L	V	E	F	K	R	G	S	T	D	I	E	P	A	L	A	E	S	W	T	V	S	D	D	G	L	T	Y	T	F	N	L	R	K	G	V	K	F	H	S	N	K	E	F	T
Template Known Secondary structure									S	S			S		S		G	G	G										T								S					T	T	S	S					S	S								T	T	S									S	S						B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
								200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.															220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	S	H	L	H	Q	R	L	L	M	L	L	Q	L	P	A	L	D	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	S	V	K	R	I	E	V	T	H	P	Q	C	L	T	F	F	L	H	R	P	D	Y	W	L	A	H	R	L	A	S	Y	C	S	H	L	A	H	P
Query Conservation		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	R	D	F	N	A	D	D	V	V	F	S	F	Q	R	Q	L	D	P	N	H	P	Y	H	N	V	S	K	A	T	Y	P	Y	F	K	A	M	K	F	S	T	L	L	K	S	V	E	K	V	D	M	H	T	V	K	I	T	L	N	R	Q	D	A	T	F	L	A	S	L	G	M	D	F	I	S	I	Y	S	A
Template Known Secondary structure			S	S																	T	T	S	T	T	T	T	G	G	G									T	T													T	T							S	S			T	T					T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
																	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	P	L	I	G	T	G	P	F	R	L	T	Q	F	T	A	.	E	L	V	R	L	E	S	H	D	Y	Y	H	L	R	H	P	L	L	K	A	V	E	Y	W	I	T	P	P	L	F	E	K	D	L	G	T	S	C	R	H	P	V	Q	I	T	I	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		E	Y	A	D	K	M	L	A	A	G	K	P	E	T	I	D	T	T	P	I	G	T	G	P	F	L	F	A	G	Y	Q	V	D	Q	K	S	R	Y	L	A	H	K	E	Y	W	K	G	K	A	D	I	D	R	L	I	F	E	I	V	P	D	A	T	A	R	Y	A	K	L	Q	A	G	A	C	D	L	I	D	F	P
Template Known Secondary structure										T	T		T	T					S				S	S	S								T	T	T								T	T		T	T				S		S																				T	S		S			S	S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		324	.	.	.	.	.	330	.	.	.								.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																																																					.	.
Query SS confidence												.	.	.	.	.	.	.																																																					.	.
Query Sequence		K	P	E	E	L	Q	R	V	S	Q	.	.	.	.	.	.	.	V	S	S	G	I	S	L	G	F	C	Y	L	T	L	R	K	S	P	R	L	S	L	W	Q	A	R	K	V	I	S	I	I	H	Q	S	G	L	L	Q	T	L	E	V	G	E	N	L	I	T	A	S	H	.	.	A	L	L	P	G	W	T	I	P
Query Conservation												.	.	.	.	.	.	.																																																					.	.
Alig confidence												.	.	.	.	.	.	.																																																					.	.
Template Conservation
Template Sequence		N	A	A	D	L	E	K	M	K	T	D	P	K	V	N	L	H	S	Q	S	G	L	N	I	A	Y	I	A	F	N	T	E	K	A	P	F	D	N	V	K	V	R	Q	A	L	N	Y	A	V	D	K	N	A	I	I	D	A	V	Y	R	G	A	G	V	A	A	K	N	P	L	P	P	T	I	W	G	Y	N	N	E
Template Known Secondary structure										T	S		T	T									S									T	T	S	T	T	T	T	S										T										T	T	T	T	S					S	S	S	S		T	T	S	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.																		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	W	Q	V	P	D	E	V	K	L	P	K	T	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	Y	H	L	P	I	E	L	H	T	M	A	E	R	L	Q	A	T	L	A	A	E	G	C	E	L	T	I	I	F	H	N	A	K	N	W	D	D	T	T	L	Q	A	H	A	D	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	G	Y	E	Y	S	P	E	K	A	K	Q	L	L	K	E	A	G	F	E	N	G	F	E	T	D	I	W	V	Q	P	V	V	R	A	S	N	P	N	P	R	R	M	A	E	L	V	Q	S	D	W	E	K	V	G	V	K	S	K	L	V	S	Y	E	W	G	D	Y	I	K	R	T	K	A	G	E	L	T	A
Template Known Secondary structure																			T	T		T	T										S	S		B	T	T	B	S															T	T	T																			T	T			S
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.		.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		M	M	G	D	R	L	I	G	E	A	P	E	Y	T	L	E	.	Q	W	L	R	C	D	P	L	W	P	H	V	F	D	A	P	A	Y	A	H	L	Q	S	T	L	D	A	V	Q	I	M	P	D	E	E	N	R	F	N	A	L	K	A	V	F	S	Q	L	M	T	D	A	T	L	T	P	L	F	N	Y	H	Y	R
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		G	T	Y	G	W	S	G	D	N	G	D	P	D	N	F	L	S	P	L	F	G	S	E	N	V	G	N	S	N	Y	A	R	F	K	N	P	E	L	D	A	L	L	H	K	A	V	G	L	S	D	K	A	E	R	A	K	I	Y	E	Q	A	Q	V	L	L	K	E	Q	A	P	W	I	N	V	A	H	S	I	N	F
Template Known Secondary structure									S	S	S		T										G	G	G	B	T	T	T	B	T	T																T		S																					S
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	P	P	G	V	N	G	V	R	L	T	P	R	G	W	F	E	F	T	E	A	W	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	T	S	K	R	V	Q	D	Y	K	Q	S	P	F	G	Y	T	Y	L	Y	G	T	K	L	A
Template Known Secondary structure						T	T			S					T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530