 |
Job Description | P46890 | Confidence | 80.63% | Date | Thu Jan 5 12:04:38 GMT 2012 |
Rank | 185 | Aligned Residues | 56 |
% Identity | 11% | Template | c3ir1F_ |
PDB info |
PDB header:protein binding | Chain: F: PDB Molecule:outer membrane lipoprotein gna1946; |
PDBTitle: crystal structure of lipoprotein gna1946 from neisseria2 meningitidis
|
Resolution | 2.15 Å |
|
 |
  |   |
406 | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | |
. | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | L | T | L | V | Y | H | L | P | I | E | L | H | T | M | A | E | R | L | Q | A | T | L | A | A | E | G | C | E | L | T | I | I | F | H | . |
N | A | K | N | W | D | D | T | T | L | Q | A | H | A | D | L | M | M | G | D |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |
Template Sequence |   |
K | E | I | V | F | G | T | T | V | G | D | F | G | D | M | V | K | E | Q | I | Q | P | E | L | E | K | K | G | Y | T | V | K | L | V | E | F | T | D | Y | V | R | P | N | L | A | L | A | E | G | E | L | D | I | N | V | F | Q |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  | T | S |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|