Job Description P46890 Confidence 75.20% Date Thu Jan 5 12:04:38 GMT 2012 Rank 205 Aligned Residues 93 % Identity 13% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	N	Q	Y	Q	R	L	W	Q	P	S	A	G	K	P	Q	T	V	T	V	S	E	L	A	E	R	C	F	C	S	E	R	H	V	R	T	L	L	R	Q	A	Q	E	A	G	W	L	E	W	Q	A	Q	S	G	R	G	K	R	G	Q	L	R	F	L	V	T	P	E	S	L	R	N	A	M	M	E	Q	A	L
Query Conservation
Alig confidence																	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.
Template Conservation																	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.
Template Sequence		A	M	E	K	I	S	C	L	V	K	S	D	I	T	R	.	.	N	W	R	W	A	D	I	C	G	E	L	R	T	N	R	M	I	L	K	K	E	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	.	R	G	V	K	F	R	E	L	I	N	S	I	R	I	S	Y	S	I	S	L	M
Template Known Secondary structure													T	T	T	S	.	.												T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	.	T	T
Template Predicted Secondary structure																	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																		.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		86	.	.	.			90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.										.
Query SS confidence						.	.										.
Query Sequence		E	T	G	K	.	.	Q	Q	D	V	L	E	L	A	Q	.	L	A	P	G	E	L	R	T	L	L	Q	P	F	M	G	G	Q	W	Q	N
Query Conservation						.	.										.
Alig confidence						.	.										.
Template Conservation
Template Sequence		K	T	G	E	F	K	I	K	Q	I	A	Y	Q	S	G	F	A	S	V	S	Y	F	S	T	V	F	K	S	T	M	N	V	A	P	S	E
Template Known Secondary structure				T											T	T		S														S	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions