Return to main results Retrieve Phyre Job Id

Job DescriptionP46890
Confidence88.26%DateThu Jan 5 12:04:38 GMT 2012
Rank157Aligned Residues39
% Identity28%Templatec3eqxB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:fic domain containing transcriptional regulator; PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60...
Predicted Secondary structure 












Query SS confidence 







































Query Sequence  VTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGK
Query Conservation    
 


  
 

 

    
  
   


 
 
  


 
Alig confidence 
































.





Template Conservation   
          
  

   
  
   
 
   .  

  
Template Sequence  CRIQNLVESGLAKRQTASVYLKQLCDIGVLEEV. QSGKEK
Template Known Secondary structure 
TTS

TTS
.TT
Template Predicted Secondary structure 







.



Template SS confidence 







































   311........320.........330.........340... ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions