Job Description P46890 Confidence 100.00% Date Thu Jan 5 12:04:38 GMT 2012 Rank 3 Aligned Residues 442 % Identity 19% Template c2wokA_ PDB info PDB header:peptide binding protein/peptide Chain: A: PDB Molecule:clavulanic acid biosynthesis oligopeptide PDBTitle: clavulanic acid biosynthesis oligopeptide2 binding protein 2 complexed with bradykinin Resolution 1.70 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.										.
Query SS confidence																																												.	.	.	.										.
Query Sequence		T	L	R	I	P	Y	Y	R	P	L	E	P	L	Q	P	G	F	L	P	G	R	A	E	Q	H	L	A	G	Q	I	F	S	G	L	T	R	F	D	N	N	T	Q	.	.	.	.	R	P	I	G	D	L	A	H	H	.	W	E	T	S	T	D	G	L	R	W	D	F	Y	L	R	S	T	L	H	W	H	N	G	D
Query Conservation																																												.	.	.	.										.
Alig confidence																																												.	.	.	.										.
Template Conservation
Template Sequence		T	L	R	L	V	S	S	A	D	V	D	S	L	D	P	A	R	T	Y	Y	V	W	V	W	L	L	Q	R	L	L	N	R	T	L	M	A	Y	P	T	D	P	G	P	A	G	L	V	P	A	P	D	L	A	E	G	P	G	E	V	S	D	G	G	R	T	W	T	Y	R	L	R	R	G	L	R	Y	D	D	G	T
Template Known Secondary structure								S	S			S		S	S	T	T	S																	S					S		S	S	G	G	G	G	S				S	S	B	S	S	S					G	G	G	T						B		S	S		B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	K	A	S	H	L	H	Q	R	L	L	M	L	L	Q	L	P	A	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	F	I	S	V	K	R	I	E	V	T	H	P	Q	C	L	T	F	F	L	H	R	P	D	Y	W	L	A	H	R	L	A	S	Y	C	S	H
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	T	S	D	D	V	R	H	A	V	Q	R	V	F	A	Q	D	V	L	P	G	G	P	T	Y	L	I	P	L	L	D	D	P	E	R	P	Y	P	G	P	Y	R	T	D	E	P	L	R	S	V	L	T	P	D	E	H	T	I	V	F	R	L	T	R	P	F	S	D	F	D	H	L	M	A	Q	P	C	A	A
Template Known Secondary structure		B													T	T		T	T	T	S	T	T	S			T							B	T	T	B					T	T	T			S			T	T						T	T							S	S			T	T						T	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		256	.	.	.	260	.									.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure								.	.	.	.	.	.	.	.														.																	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.														.																	.	.	.	.	.
Query Sequence		L	A	H	P	Q	F	.	.	.	.	.	.	.	.	P	L	I	G	T	G	P	F	R	L	T	Q	F	.	T	A	E	L	V	R	L	E	S	H	D	Y	Y	H	L	R	.	.	.	.	.	H	P	L	L	K	A	V	E	Y	W	I	T	P	P	L	F	E	K	D	L	G	T	S	C	R	H	P	V	Q	I	T
Query Conservation								.	.	.	.	.	.	.	.														.																	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.														.																	.	.	.	.	.
Template Conservation
Template Sequence		P	V	P	R	R	S	D	T	G	A	D	Y	G	R	D	P	R	S	S	G	P	Y	R	V	A	R	H	E	P	D	T	L	L	H	L	E	R	N	P	H	W	D	R	A	T	D	P	I	R	P	A	L	P	D	R	V	E	L	T	I	G	L	D	V	D	V	L	D	A	R	L	I	A	G	E	F	D	I	N	L
Template Known Secondary structure					G	G	G			G	G	G	G	G	G	S					S	S								T	T	T								T	T			G	G	G		S	S						S																			T	T	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.													.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	K	P	E	E	L	Q	R	V	S	Q	V	S	.	.	.	.	.	.	.	.	.	.	.	.	S	G	I	S	L	G	F	C	Y	L	T	L	R	K	S	P	R	L	S	L	W	Q	A	R	K	V	I	S	I	I	H	Q	S	G	L	L	Q	T	L	E	V	G	E	N	L	I	T	A	S	H	A	L	L	P
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	R	G	L	Q	H	A	A	Q	R	R	A	T	A	D	E	V	L	R	S	H	T	D	N	P	R	T	S	F	L	H	F	V	A	M	Q	P	H	I	P	P	F	D	N	V	H	V	R	R	A	V	Q	Y	A	A	D	K	I	L	L	Q	D	A	R	G	G	P	V	N	G	G	D	L	T	T	A	L	F	P
Template Known Secondary structure		S																				T	T																T	T	S	T	T	T	T	S																				T	T	T	T	T	S	S					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		390	.	.	.	.	.	.	.										.	.	400	.	.	.	.	.	.	.												.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query SS confidence										.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query Sequence		G	W	T	I	P	H	W	Q	.	.	.	.	.	.	.	.	.	V	P	D	E	V	K	L	P	K	T	.	.	.	.	.	.	.	.	.	.	.	L	T	L	V	Y	H	L	P	I	E	L	H	T	M	A	E	R	L	Q	A	T	L	A	A	E	G	C	E	L	T	I	I	F	H	N	A	K	N	W	D	.	.
Query Conservation										.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.																																									.	.
Alig confidence										.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation
Template Sequence		P	T	L	P	A	H	Q	D	L	D	L	Y	P	T	G	P	D	L	R	G	D	L	D	A	A	R	A	E	L	A	A	A	G	L	P	D	G	F	R	A	V	I	G	T	Q	R	G	K	F	R	L	V	A	D	A	V	V	E	S	L	A	R	V	G	I	E	L	T	V	K	E	L	D	V	A	T	Y	F	S	L
Template Known Secondary structure		T	T	S	T	T						S	S				T	T	S	S													T	T		T	T										T	T															T	T	T										S	T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
							448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.						480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																	.	.	.	.	.
Query Sequence		.	.	.	.	.	D	T	T	L	Q	A	H	A	D	L	M	M	G	D	R	L	I	G	E	A	P	E	Y	T	L	E	Q	W	L	R	C	D	.	.	.	.	.	P	L	W	P	H	V	F	D	A	P	A	Y	A	H	L	Q	S	T	L	D	A	V	Q	I	M	P	D	E	E	N	R	F	N	A	L	K	A	V
Query Conservation		.	.	.	.	.																																	.	.	.	.	.
Alig confidence		.	.	.	.	.																																	.	.	.	.	.
Template Conservation
Template Sequence		G	A	G	H	P	E	T	V	R	E	H	G	L	G	L	L	V	T	D	W	G	A	D	F	P	T	E	Y	G	F	L	A	P	L	V	D	G	R	Q	I	K	R	N	G	G	N	W	N	L	P	E	L	D	D	P	E	V	N	A	L	I	D	E	T	L	H	T	T	D	P	A	A	R	A	E	L	W	R	A	V
Template Known Secondary structure			T	T								T	T											S	S	S	S											G	G	G			T	T	S					T	T																T
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		F	S	Q	L	M	T	D	A	T	L	T	P	L	F	N	Y	H	Y	R	I	S	A	P	P	G	V	N	G	V	R	L	T	P	.	R	G	W	F	E	F	T	E	A	W	L	P	A
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		E	R	R	V	M	E	H	A	V	L	L	P	L	V	H	D	K	T	L	H	F	R	N	P	W	V	T	N	V	Y	V	H	P	A	F	G	L	Y	D	I	Q	A	M	G	L	A	E
Template Known Secondary structure									T																T	T			S	B		B		T	T	T	S	S	B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560