Job Description P46890 Confidence 95.38% Date Thu Jan 5 12:04:38 GMT 2012 Rank 65 Aligned Residues 111 % Identity 14% Template c2nyxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404; PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	N	R	L	N	Q	Y	Q	R	L	W	Q	P	S	A	G	K	P	Q	T	V	T	V	S	E	L	A	E	R	C	F	C	S	E	R	H	V	R	T	L	L	R	Q	A	Q	E	A	G	W	L	E	W	Q	A	Q	S	G	R	G	K	R	G	Q	L	R	F	L	V	T	P	E	S	L	R	N	A	M	M	E
Query Conservation
Alig confidence																		.	.	.	.	.																																				.
Template Conservation																		.	.	.	.	.																																				.
Template Sequence		T	I	P	Q	F	R	T	L	V	I	L	S	N	H	G	P	.	.	.	.	.	I	N	L	A	T	L	A	T	L	L	G	V	Q	P	S	A	T	G	R	X	V	D	R	L	V	G	A	E	L	I	D	R	L	P	H	.	P	T	S	R	R	E	L	L	A	A	L	T	K	R	G	R	D	V	V	R	Q	V	T
Template Known Secondary structure																	S	.	.	.	.	.											T	S															T	T	S							.	S	S	S		S
Template Predicted Secondary structure																		.	.	.	.	.																																				.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	E	T	G	K	Q	Q	D	V	L	E	L	A	Q	L	A	P	G	E	L	R	T	L	L	Q	P	F	M	G	G	Q	W	Q	N	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	R	R	T	E	I	A	R	I	V	E	Q	X	A	P	A	E	R	H	G	L	V	R	A	L	T	A	F	T	E	A	G	G	E	P	D
Template Known Secondary structure													T	T	S		G	G	G		S	S													T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions