Return to main results Retrieve Phyre Job Id

Job DescriptionP33231
Confidence3.88%DateThu Jan 5 11:51:31 GMT 2012
Rank23Aligned Residues42
% Identity19%Templatec1wrgA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:light-harvesting protein b-880, beta chain; PDBTitle: light-harvesting complex 1 beta subunit from wild-type2 rhodospirillum rubrum
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   509510.........520.........530.........540.... .....550.
Predicted Secondary structure 




.




Query SS confidence 



































.






Query Sequence  AAVGLVGKESDLFRFTVKHSLIFTCIVGVITTLQAY. VLTWMIP
Query Conservation 
 


 
 

 


 

   
    
 

   
   .      
Alig confidence 



































.




.
Template Conservation 













 

  

  
  





 


 



 .
Template Sequence  SLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWV. P
Template Known Secondary structure  TTSS
SSSS.
Template Predicted Secondary structure 







.
Template SS confidence 











































   7..10.........20.........30.........40........ .
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions