Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6R3
Confidence35.31%DateThu Jan 5 11:03:44 GMT 2012
Rank344Aligned Residues30
% Identity20%Templatec2l0kA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:stage iii sporulation protein d; PDBTitle: nmr solution structure of a transcription factor spoiiid in complex2 with dna
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90..
Predicted Secondary structure 





Query SS confidence 





























Query Sequence  LDMVMQYTRGNQTRAALMMGINRGTLRKKL
Query Conservation 
  

    

   

  


 
 

  

Alig confidence 





























Template Conservation 

 


   



  

 











Template Sequence  IGKYIVETKKTVRVIAKEFGVSKSTVHKDL
Template Known Secondary structure 


TS
Template Predicted Secondary structure 




Template SS confidence 





























   12.......20.........30.........40.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions