 |
Job Description | P12282 | Confidence | 95.36% | Date | Thu Jan 5 11:33:08 GMT 2012 |
Rank | 281 | Aligned Residues | 94 |
% Identity | 22% | Template | d1q1ra2 |
SCOP info | FAD/NAD(P)-binding domain
| FAD/NAD(P)-binding domain
| FAD/NAD-linked reductases, N-terminal and central domains
|
Resolution | 1.91 |
|
 |
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | D | S | R | V | L | I | V | G | L | G | G | L | G | C | A | A | S | Q | Y | L | A | S | A | G | V | G | N | L | T | L | L | D | F | D | T | V | S | L | S | N | L | Q | R | Q | T | L | H | S | D | A | T | V | G | Q | P | K | V | E | S | A | R | D | A | L | T | R | I | N | P | H | I | A | I | T | P | V | N | A | L |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|   |
|
|   |
|   |   |
|   |   |   |
|
|   |   |
|
|
|   |
|   |
|
|
|   |
|   |
|   |   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   | . |   |
|
|
|
|   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
A | D | N | R | L | V | V | I | G | G | G | Y | I | G | L | E | V | A | A | T | A | I | K | A | N | M | . |
H | V | T | L | L | D | T | A | A | R | V | L | E | R | V | . |
. |
. |
. |
. |
. |
T | A | P | P | V | S | A | F | Y | E | H | L | H | R | E | A | G | V | D | I | R | T | G | T | Q | V | C | G | F | E | M | S |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . |  |  |  |  |  |
| S | S | S | S | T | T | T | T | T | . | . | . | . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |
| S |
|
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
  |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | D | A | E | L | A | A | L | I | A | E | . |
. |
. |
. |
. |
. |
H | D | L | V | L | D | C | T | D |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |
|
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|
Template Sequence |   |
T | D | Q | Q | K | V | T | A | V | L | C | E | D | G | T | R | L | P | A | D | L | V | I | A | G | I | G |
Template Known Secondary structure |   |
T | T | T |
|
|  |  |  |  |  |  | T | T | S |
|  |  |  |
| S |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|