Return to main results Retrieve Phyre Job Id

Job DescriptionP12282
Confidence93.93%DateThu Jan 5 11:33:08 GMT 2012
Rank448Aligned Residues61
% Identity28%Templatec3tjrA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a rv0851c ortholog short chain dehydrogenase from2 mycobacterium paratuberculosis
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930......... 40.........50.........60.........70.........80.........90.........100.......
Predicted Secondary structure 



.
























Query SS confidence 










.



































































Query Sequence  LKDSRVLIVGL. GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN
Query Conservation 
    
 


 .

 
  
   

  


 
 


 
 
   

 

 
    


  

      
   

   
    
Alig confidence 










.















.








...................






















Template Conservation 
 

 






 


 
 
  
   

. 
    
  ...................         
             
Template Sequence  FDGRAAVVTGGASGIGLATATEFARRGA. RLVLSDVDQ. . . . . . . . . . . . . . . . . . . PALEQAVNGLRGQGFDAHGVVCD
Template Known Secondary structure  STT
TTTSTT
.S
...................TT



Template Predicted Secondary structure 










.

...................





Template SS confidence 















































































   8.10.........20.........30..... ....40.... .....50.........60.......
 
   108.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  AL
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  VR
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 

   68.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions