Job Description P12282 Confidence 100.00% Date Thu Jan 5 11:33:08 GMT 2012 Rank 8 Aligned Residues 230 % Identity 32% Template c3kydB_ PDB info PDB header:ligase Chain: B: PDB Molecule:sumo-activating enzyme subunit 2; PDBTitle: human sumo e1~sumo1-amp tetrahedral intermediate mimic Resolution 2.61 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	R	G	F	D	F	D	G	Q	E	A	L	K	D	S	R	V	L	I	V	G	L	G	G	L	G	C	A	A	S	Q	Y	L	A	S	A	G	V	G	N	L	T	L	L	D	F	D	T	V	S	L	S	N	L	Q	R	Q	T	L	H	S	D	A	T	V	G	Q	P	K	V	E	S	A	R	D	A	L	T	R
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		R	G	.	.	L	P	R	E	L	A	E	A	V	A	G	G	R	V	L	V	V	G	A	G	G	I	G	C	E	L	L	K	N	L	V	L	T	G	F	S	H	I	D	L	I	D	L	D	T	I	D	V	S	N	L	N	R	Q	F	L	F	Q	K	K	H	V	G	R	S	K	A	Q	V	A	K	E	S	V	L	Q
Template Known Secondary structure			S	.	.	S																			S														T											B				B	T	T	B			S	S			G	G	G	T	T	S	B											T
Template Predicted Secondary structure				.	.
Template SS confidence
		5	.			.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		I	N	P	H	I	A	I	T	P	V	N	A	L	L	D	D	A	E	.	L	A	A	L	I	A	E	H	D	L	V	L	D	C	T	D	N	V	A	V	R	N	Q	L	N	A	G	C	F	A	A	K	V	P	L	V	S	G	A	A	I	R	M	E	G	Q	I	T	V	F	T	Y	Q	D	G	E	P	C	Y	R	C
Query Conservation																				.
Alig confidence																				.																																																			.
Template Conservation																																																																							.
Template Sequence		F	Y	P	K	A	N	I	V	A	Y	H	D	S	I	M	N	P	D	Y	N	V	E	F	F	R	Q	F	I	L	V	M	N	A	L	D	N	R	A	A	R	N	H	V	N	R	M	C	L	A	A	D	V	P	L	I	E	S	G	T	A	G	Y	L	G	Q	V	T	T	I	.	K	K	G	V	T	E	C	Y	E	C
Template Known Secondary structure		T		T	T								S		T	T	S	T	T	S						T	T		S							S																T										T	T								.		T	T	T	S			T	T	S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.
		176	.													.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	.	.	.	.	.	.	.	.	.	.	.	.	R	L	F	G	E	N	A	L	T	C	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	P	K	P	T	Q	R	T	F	P	G	C	T	I	R	N	T	P	S	E	P	I	H	C	I	V	W	A	K	Y	L	F	N	Q	L	F	T	K	E	W	A	K	S	T	G	Y	D	P	V	K	L	F	T	K	L	F	K	D	D	I	R	Y	L	L	T	M	D	K	L	W	R	K	R	K	P	P	V	P	L	D
Template Known Secondary structure		S						S	S					S			S	S		S	S	T												T	T	T										T	S		T	T	T	T					T	T							T	T			S	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
																																																																													191	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	M	A	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	A	E	V	Q	S	Q	D	Q	Q	V	L	D	V	K	S	Y	A	R	L	F	S	K	S	I	E	T	L	R	V	H	L	A	E	K	D	K	D	D	P	S	A	M	D	F	V	T	S	A	A	N	L	R	M	H	I	F	S	M	N	M	K	S	R	F	D	I	K	S	M	A	G	N	I	I	P	A	I	A	T
Template Known Secondary structure																																								S																		T	T															T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		L	I	G	V	I	G	S	L	Q	A	M	E	A	I	K	M	L	A	G	Y	G	K	P	A	S	G	K	I	V	M	Y	D	A	M	.	.	.	T	C	Q	F	R	E	M	K	L	M	R	N	P	G	C	E	V	C	G	Q
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.
Template Conservation
Template Sequence		T	N	A	V	I	A	G	L	I	V	L	E	G	L	K	I	L	S	G	K	I	D	Q	C	R	T	I	F	L	N	K	Q	P	N	P	R	K	K	L	L	V	P	C	A	L	D	P	P	N	P	N	C	Y	V	C	A	S
Template Known Secondary structure																			T	T		G	G	G								S	S			T	T			S											T	T		T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions