Return to main results Retrieve Phyre Job Id

Job DescriptionP12282
Confidence97.87%DateThu Jan 5 11:33:08 GMT 2012
Rank20Aligned Residues96
% Identity23%Templatec3ic5A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative saccharopine dehydrogenase; PDBTitle: n-terminal domain of putative saccharopine dehydrogenase from ruegeria2 pomeroyi.
Resolution2.08 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90.........100.........110..
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  RVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDD
Query Conservation   
 


 

 
  
   

  


 
 


 
 
   

 

 
    


  

      
   

   
      
  
Alig confidence 









































.........................









.

Template Conservation 

 


 
 

      
       
                .........................          .  
Template Sequence  NICVVGAGKIGQXIAALLKTSSNYSVTVADHDLAALAVLNRX. . . . . . . . . . . . . . . . . . . . . . . . . GVATKQVDAK. DE
Template Known Secondary structure 

S
SSS
TT.........................T


TT.
Template Predicted Secondary structure 
















.........................


.
Template SS confidence 















































































   4.....10.........20.........30.........40..... ....50..... ..
 
   113......120.........130.........140.........150.....
Predicted Secondary structure 













Query SS confidence 










































Query Sequence  AELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAI
Query Conservation            



   
       
        
  
     
Alig confidence 



















.





















Template Conservation    
       
 

   
  . 
     
 
  
 

 


 
Template Sequence  AGLAKALGGFDAVISAAPFF. LTPIIAKAAKAAGAHYFDLTED
Template Known Secondary structure  TTT
S
S
GG.GTT



S
Template Predicted Secondary structure 







.









Template SS confidence 










































   58.60.........70....... ..80.........90.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions