Job Description P12282 Confidence 95.96% Date Thu Jan 5 11:33:08 GMT 2012 Rank 218 Aligned Residues 87 % Identity 18% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	I	V	G	L	G	G	L	G	C	A	A	S	Q	Y	L	A	S	A	G	V	G	N	L	T	L	L	D	F	D	T	V	S	L	S	N	L	Q	R	Q	T	L	H	S	D	A	T	V	G	Q	P	K	V	E	S	A	R	D	A	L	T	R	I	N	P	H	I	A	I	T	P	V	N	A	L	L	D	D
Query Conservation
Alig confidence																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	.	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	L	G	N	A	A	N
Template Known Secondary structure									S													T	T		.							S											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		T	T	S
Template Predicted Secondary structure																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.																												.	.	.	.	.	.	.	470
		113	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		A	E	L	A	A	L	.	.	I	A	E	H	D	L	V	L	D	C	T	D	N	V	A	V	R	N	Q	L	N	A	G	C	F	A	A	K	V
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P
Template Known Secondary structure								T	T	G	G	G		S							S																	S
Template Predicted Secondary structure
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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