Job Description P12282 Confidence 96.16% Date Thu Jan 5 11:33:08 GMT 2012
Rank 186 Aligned Residues 96
% Identity 21% Template c2vdcI_
PDB info
PDB header: oxidoreductaseChain: I: PDB Molecule: glutamate synthase [nadph] small chain;
PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications.
Resolution 9.50 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
31 . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
D S R V L I V G L G G L G C A A S Q Y L A S A G V G N L T L L D F D T V S L S N L Q R Q T L H S D A T V G Q P K V E S A R D A L T R I N P H I A I T P V N A L L
Query Conservation  
                                                                                           
Alig confidence  
. . . . .
Template Conservation  
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Template Sequence  
G L S V G V I G A G P A G L A A A E E L R A K G Y .
E V H V Y D R Y D R .
.
.
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M G G L L V Y G I P G F K L E K S V V E R R V K L L A D A G V I Y H P N F E V G
Template Known Secondary structure  
S T . S S S S . . . . S T T S T T T S T T T T B T
Template Predicted Secondary structure  
. . . . .
Template SS confidence  
   
147 . . 150 . . . . . . . . . 160 . . . . . . . . . 170 .
. . . . . . . . 180 .
. . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 .
 
   
111 . . . . . . . . 120 . . . . . . . . . 130 .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
D D A E L A A L I A E H D L V L D C T D N
Query Conservation  
                               
Alig confidence  
Template Conservation  
                                       
Template Sequence  
R D A S L P E L R R K H V A V L V A T G V
Template Known Secondary structure  
T T B S S S
Template Predicted Secondary structure  
Template SS confidence  
   
222 . . . . . . . 230 . . . . . . . . . 240 . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]