Return to main results Retrieve Phyre Job Id

Job DescriptionP12282
Confidence96.55%DateThu Jan 5 11:33:08 GMT 2012
Rank136Aligned Residues75
% Identity20%Templatec2hlpB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the e267r mutant of a halophilic2 malate dehydrogenase in the apo form
Resolution2.59 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32...... .40.........50..... ....60.........70.........80.........90...... ...100......
Predicted Secondary structure 


.



.

















...



Query SS confidence 






.
















.








































. . .









Query Sequence  SRVLIVG. LGGLGCAASQYLASAGV. GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTR. . . INPHIAITPV
Query Conservation    
 


. 

 
  
   

  

.
 
 


 
 
   

 

 
    


  

      
  ... 

   
   
Alig confidence 






.
















.






.................
















...









Template Conservation   

 



 
 

  
   
       

 
 
.................             

               
Template Sequence  TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVD. . . . . . . . . . . . . . . . . IPDKEDDTVGQAADTNHGIAYDSNTRVRQG
Template Known Secondary structure 
TTTSTT

S
.................
GGGTTT



Template Predicted Secondary structure 









.................










Template SS confidence 















































































   22.......30.........40.........50.... .....60.........70.........80....
 
   107..110.........120.........130.
Predicted Secondary structure 











Query SS confidence 
























Query Sequence  NALLDDAELAALIAEHDLVLDCTDN
Query Conservation     
            



   
 
Alig confidence 


........













Template Conservation     ........

  




  
  
Template Sequence  GYE. . . . . . . . DTAGSDVVVITAGI
Template Known Secondary structure 
GG........GGTT
S



Template Predicted Secondary structure  ........






Template SS confidence 
























   84.. ...90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions