Job Description P12282 Confidence 95.69% Date Thu Jan 5 11:33:08 GMT 2012 Rank 245 Aligned Residues 91 % Identity 15% Template c2f1kD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of synechocystis arogenate dehydrogenase Resolution 1.55 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	I	V	G	L	G	G	L	G	C	A	A	S	Q	Y	L	A	S	A	G	V	G	N	L	T	L	L	D	F	D	T	V	S	L	S	N	L	Q	R	Q	T	L	H	S	D	A	T	V	G	Q	P	K	V	E	S	A	R	D	A	L	T	R	I	N	P	H	I	A	I	T	P	V	N	A	L	L	D	D
Query Conservation
Alig confidence																									.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	G	V	V	G	L	G	L	I	G	A	S	L	A	G	D	L	R	R	R	G	H	.	Y	L	I	G	V	S	R	Q	Q	S	T	C	E	K	A	V	E	R	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	E	A
Template Known Secondary structure									S													T	T		.							S											T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																									.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																																	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	A	A	L	I	A	E	H	D	L	V	L	D	C	T	D	N	V	A	V	R	N	Q	L	N	A	G	C	F	A	A	K	V	P	L	V	S	G	A	A	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	D	L	S	L	L	Q	T	A	K	I	I	F	L	C	T	P	I	Q	L	I	L	P	T	L	E	K	L	I	P	H	L	S	P	T	A	I	V	T	D	V	A	S
Template Known Secondary structure			S		G	G	G	G	T	T		S						S		G	G	G									G	G	G	S		T	T								S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions