Job Description P0ACF8 Confidence 17.52% Date Thu Jan 5 11:18:05 GMT 2012 Rank 18 Aligned Residues 72 % Identity 17% Template c3ivpD_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630. Resolution 2.02 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	E	A	L	K	I	L	N	N	I	R	T	L	R	A	Q	A	R	E	C	T	L	E	T	L	E	E	M	L	E	K	L	E	V	V	V	N	E	R	R	E	E	E	S	A	A	A	A	E	V	E	E	R	T	R	K	L	Q	Q	Y	R	E	M	L	I	A	D	G	I	D	P	N	E	L	L	N	S	L	A
Query Conservation
Alig confidence																			.																								.	.	.	.	.	.	.	.	.
Template Conservation																			.																								.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	D	F	R	A	L	G	L	A	I	K	E	A	R	K	K	.	Q	G	L	T	R	E	Q	V	G	A	X	I	E	I	D	P	R	Y	L	T	N	I	E	.	.	.	.	.	.	.	.	.	N	K	G	Q	H	P	S	L	Q	V	L	Y	D	L	V	S	L	L	N	V	S	V	D	E	F	F	L	P	A	S
Template Known Secondary structure																			.	T	T											T	S										.	.	.	.	.	.	.	.	.		S																	T			S					S		T	T
Template Predicted Secondary structure																			.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		77	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions