Job Description P18392 Confidence 98.94% Date Thu Jan 5 11:36:55 GMT 2012 Rank 36 Aligned Residues 86 % Identity 21% Template c3na3A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:dna mismatch repair protein mlh1; PDBTitle: mutl protein homolog 1 isoform 1 from homo sapiens Resolution 2.50 Å

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		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	R	V	L	D	N	L	L	N	N	A	L	R	Y	C	H	S	T	V	E	T	S	L	L	L	S	G	N	R	A	T	L	I	V	E	D	D	G	P	G	I	A	P	E	N	R	E	H	I	F	E	P	F	V	R	L	D	P	S	R	D	R	S	T	G	G	C	G	L	G	L	A	I	V	H	S	I	A	L
Query Conservation
Alig confidence																										.																																		.	.	.																		.	.
Template Conservation																										.																																		.	.	.																		.	.
Template Sequence		P	A	N	A	I	K	E	M	I	E	N	C	L	D	A	K	S	T	S	I	Q	V	I	V	.	K	E	G	G	L	K	L	I	Q	I	Q	D	N	G	T	G	I	R	K	E	D	L	D	I	V	C	E	R	F	T	T	S	K	.	.	.	L	Q	S	F	G	F	R	G	E	A	L	A	S	I	S	H	V	.	.
Template Known Secondary structure																T	T		S							.		G	G	G	T	S								S					G	G	G	G	G	T	T	T	S	T	T			S	S	.	.	.							T	T									S	.	.
Template Predicted Secondary structure																										.																																		.	.	.																		.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	G	G	T	V	N	C	D	T	S	E	L	G	G
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	H	V	T	I	T	T	K	T	A	D	G
Template Known Secondary structure		.	.	.	S									T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					111	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions