Job Description P18392 Confidence 99.72% Date Thu Jan 5 11:36:55 GMT 2012 Rank 23 Aligned Residues 116 % Identity 20% Template c2zbkB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms Resolution 3.56 Å

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		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.						.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.										.	.	.																																										.
Query SS confidence																							.	.	.	.	.										.	.	.																																										.
Query Sequence		M	R	L	M	E	R	V	L	D	N	L	L	N	N	A	L	R	Y	C	H	S	.	.	.	.	.	T	V	E	T	S	L	L	L	S	.	.	.	G	N	R	A	T	L	I	V	E	D	D	G	P	G	I	A	P	E	N	R	E	H	I	F	E	P	F	V	R	L	D	P	S	R	D	R	S	T	G	G	C	.
Query Conservation																							.	.	.	.	.										.	.	.																																										.
Alig confidence																							.	.	.	.	.										.	.	.																																										.
Template Conservation
Template Sequence		A	R	A	L	Y	Q	T	V	R	E	L	I	E	N	S	L	D	A	T	D	V	H	G	I	L	P	N	I	K	I	T	I	D	L	I	D	D	A	R	Q	I	Y	K	V	N	V	V	D	N	G	I	G	I	P	P	Q	E	V	P	N	A	F	G	R	V	L	Y	S	S	K	Y	V	N	R	Q	T	R	G	M	Y
Template Known Secondary structure																		T	T	T	T	T	T	T														T	T	T	T										S					G	G	G	S					T	S				S						S			S		S	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.				.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																			.											.	.	.
Query SS confidence																			.											.	.	.
Query Sequence		G	L	G	L	A	I	V	H	S	I	A	L	A	M	G	G	T	.	V	N	C	D	T	S	E	L	G	G	.	.	.	A	R	F	S	F	S	W	P	L	W	H	N	I	P	Q	F	T	S
Query Conservation																			.											.	.	.
Alig confidence																			.											.	.	.
Template Conservation
Template Sequence		G	L	G	V	K	A	A	V	L	Y	S	Q	M	H	Q	D	K	P	I	E	I	E	T	S	P	V	N	S	K	R	I	Y	T	F	K	L	K	I	D	I	N	K	N	E	P	I	I	V	E
Template Known Secondary structure		S	S																								T	T		S											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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