Job Description P18392 Confidence 98.28% Date Thu Jan 5 11:36:55 GMT 2012 Rank 41 Aligned Residues 111 % Identity 21% Template c1ei1B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna gyrase b; PDBTitle: dimerization of e. coli dna gyrase b provides a structural mechanism2 for activating the atpase catalytic center Resolution 2.30 Å

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		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.									.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.					.	.	.	.
Predicted Secondary structure																		.	.																															.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence																		.	.																															.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		M	E	R	V	L	D	N	L	L	N	N	A	L	R	Y	C	.	.	H	S	T	V	E	T	S	L	L	L	S	G	N	R	A	T	L	I	V	E	D	D	G	P	G	I	A	P	E	N	.	.	.	.	.	.	.	.	R	E	H	I	F	E	P	F	V	R	L	D	P	S	R	D	.	.	.	.	R	S	T	G
Query Conservation																		.	.																															.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence																		.	.															.																.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																		.
Template Sequence		L	H	H	M	V	F	E	V	V	D	N	A	I	D	E	A	L	A	G	H	C	K	E	I	I	V	T	I	H	A	D	N	.	S	V	S	V	Q	D	D	G	R	G	I	P	T	G	I	H	P	E	E	G	V	S	A	A	E	V	I	M	T	V	L	H	A	G	G	K	F	D	D	N	S	Y	K	V	S	G	G
Template Known Secondary structure																			T	T											T	T	S	.								S	S					S	B		T	T	T	S	S	B								S	T	T		S	S		S	S	S	S	S		S	S		S
Template Predicted Secondary structure																																		.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.																						.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	G	L	G	L	A	I	V	H	S	I	A	L	A	M	G	G	T	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	T	S	E	L	G	G	A	R	F	S	F	S	W	P	L	W	H	N	I	P	Q	F	T	S
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																										.
Template Sequence		L	H	G	V	G	V	S	V	V	N	A	L	S	Q	K	L	E	L	V	I	Q	R	E	G	K	I	H	R	Q	I	Y	E	H	G	V	P	Q	A	P	L	A	V	T	G	E	T	E	K	T	G	T	M	V	R	F	W	.	P	S	L	E	T	F	T	N	V	T	E
Template Known Secondary structure			S	S									T											T	T									T	T			S	S									S										.			T	T	T			S			S
Template Predicted Secondary structure																																																										.
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570		.	.	.	.	.	.	.	.	.	580	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions