Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF88
Confidence59.43%DateThu Jan 5 11:31:46 GMT 2012
Rank500Aligned Residues70
% Identity19%Templated3broa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.04

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10......... 20.........30.........40.........50......
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Query Sequence  TFTAEEKASVFELWKN. . . GTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAV. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DLTGTQXTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRXEIKKLLYRKVSGKDSRQKCLKLTKKANKLETIILSY
Template Known Secondary structure  T

TTTS

BT

TTS
SS
TTS
TT
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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   57..60.........70...
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Query Sequence  . . . . . . . . . AHLTLSEREEIRAGLSA
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Template Sequence  XDSDQSQXTSGLNKEEVVFLEKILKR
Template Known Secondary structure  TTT

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   108.110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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