Job Description P0CF88 Confidence 98.65% Date Thu Jan 5 11:31:46 GMT 2012 Rank 20 Aligned Residues 85 % Identity 27% Template d2jn6a1 SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like Cgl2762-like Resolution UNK

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Show / Hide Conservation and Alignment quality

		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure				.																		.	.
Query SS confidence				.																		.	.
Query Sequence		M	R	.	R	T	F	T	A	E	E	K	A	S	V	F	E	L	W	K	N	.	.	G	T	G	F	S	E	I	A	N	I	L	G	S	K	P	G	T	I	F	T	M	L	R	D	T	G	G	I	K	P	H	E	R	K	R	A	V	A	H	L	T	L	S	E	R	E	E	I	R	A	G	L	S	A	K	M	S	I
Query Conservation				.																		.	.
Alig confidence				.																		.	.																														.	.
Template Conservation																																																					.	.
Template Sequence		M	P	T	K	T	Y	S	E	E	F	K	R	D	A	V	A	L	Y	E	N	S	D	G	A	S	L	Q	Q	I	A	N	D	L	G	I	N	R	V	T	L	K	N	W	I	I	K	Y	G	S	N	H	.	.	N	V	Q	G	T	T	P	S	A	A	V	S	E	A	E	Q	I	R	Q	L	K	K	E	N	A	L	Q
Template Known Secondary structure																				T	T	G	G	G	S										T	S																S	.	.	T	T		S									T											G	G	G	G
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	I	A	T	A	L	N	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	R	T	R	H	P	A	E	S
Template Known Secondary structure		G	G	T	T	S				T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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