Job Description P0CF88 Confidence 94.82% Date Thu Jan 5 11:31:46 GMT 2012 Rank 48 Aligned Residues 76 % Identity 18% Template d1vz0a1 SCOP info DNA/RNA-binding 3-helical bundle KorB DNA-binding domain-like KorB DNA-binding domain-like Resolution 2.3

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		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.													.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure								.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	T	A	E	E	K	.	A	S	V	F	E	L	W	K	N	G	T	G	F	S	E	I	A	N	I	L	G	S	K	P	G	T	I	F	T	M	L	R	.	.	.	.	.	.	.	.	.	.	.	.	D	T	G	G	I	K	P	H	E	R	K	R	A	V	A	H	L	T	L	S	E	R	E	E	I	R	A	G	L
Query Conservation								.																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	P	V	E	E	A	R	G	Y	Q	A	L	L	E	M	G	L	T	Q	E	E	V	A	R	R	V	G	K	A	R	S	T	V	A	N	A	L	R	L	L	Q	L	P	P	E	A	L	E	A	L	E	R	G	E	I	T	A	G	H	A	R	A	L	L	M	L	E	P	E	D	R	L	W	G	L	K	E	I	L
Template Known Secondary structure																	T	T											T												G	G	G	S										T	T	S	S										T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	K	M	S	I	R	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	G	L	S	V	R	Q	A
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions