Job Description P0CF88 Confidence 98.35% Date Thu Jan 5 11:31:46 GMT 2012 Rank 22 Aligned Residues 93 % Identity 25% Template d1pdnc_ SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain Resolution 2.50

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.
Predicted Secondary structure																																									.	.	.											.																							.	.
Query SS confidence																																									.	.	.											.																							.	.
Query Sequence		R	T	F	T	A	E	E	K	A	S	V	F	E	L	W	K	N	G	T	G	F	S	E	I	A	N	I	L	G	S	K	P	G	T	I	F	T	M	L	.	.	.	R	D	T	G	G	I	K	P	H	E	.	R	K	R	A	V	A	H	L	T	L	S	E	R	E	E	I	R	A	G	L	S	A	.	.	K	M	S
Query Conservation																																									.	.	.											.																							.	.
Alig confidence																																									.	.	.											.																							.	.
Template Conservation
Template Sequence		R	P	L	P	N	N	I	R	L	K	I	V	E	M	A	A	D	G	I	R	P	C	V	I	S	R	Q	L	R	V	S	H	G	C	V	S	K	I	L	N	R	Y	Q	E	T	G	S	I	R	P	G	V	I	G	G	S	K	P	R	I	A	T	P	E	I	E	N	R	I	E	E	Y	K	R	S	S	P	G	M	F
Template Known Secondary structure		S																T	T											T																			S	S					S						S	S		S	T								T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		77	.	.	80	.	.	.	.				.	.								.	.	.	90	.	.	.	.	.
Predicted Secondary structure										.	.	.			.	.	.	.	.	.	.
Query SS confidence										.	.	.			.	.	.	.	.	.	.
Query Sequence		I	R	A	I	A	T	A	L	.	.	.	N	R	.	.	.	.	.	.	.	S	P	S	T	I	S	R	E	V
Query Conservation										.	.	.			.	.	.	.	.	.	.
Alig confidence										.	.	.			.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	W	E	I	R	E	K	L	I	R	E	G	V	C	D	R	S	T	A	P	S	V	S	A	I	S	R	L	V
Template Known Secondary structure												T	S	S	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions