Job Description P0CF88 Confidence 89.39% Date Thu Jan 5 11:31:46 GMT 2012 Rank 128 Aligned Residues 83 % Identity 13% Template d1j1va_ SCOP info DNA/RNA-binding 3-helical bundle TrpR-like Chromosomal replication initiation factor DnaA C-terminal domain IV Resolution 2.10

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																					.													.
Query SS confidence																																																					.													.
Query Sequence		F	S	E	I	A	N	I	L	G	S	K	P	G	T	I	F	T	M	L	R	D	T	G	G	I	K	P	H	E	R	K	R	A	V	A	H	L	T	L	S	E	R	E	E	I	R	A	G	L	S	A	.	K	M	S	I	R	A	I	A	T	A	L	N	.	R	S	P	S	T	I	S	R	E	V	Q	R	N	R	G
Query Conservation																																																					.													.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.																						.													.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	T	V	A	E	Y	Y	K	I	K	V	A	D	L	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	R	S	R	S	V	A	R	P	R	Q	X	A	X	A	L	A	K	E	L	T	N	H	S	L	P	E	I	G	D	A	F	G	G	R	D	H	T	T	V	L	H	A	C	R	K	I	E	Q
Template Known Secondary structure									T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	.																						S											T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.														.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	Y	Y	K	A	V	D	A	N	N	R	A	N	R	M	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	E	E	S	H	D	I	K	E	D	F	S	N	L	I	R	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions