Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF88
Confidence59.69%DateThu Jan 5 11:31:46 GMT 2012
Rank497Aligned Residues23
% Identity17%Templated1i5za1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.......
Predicted Secondary structure 





Query SS confidence 






















Query Sequence  MSIRAIATALNRSPSTISREVQR
Query Conservation   
 
 

  

   


 


 
Alig confidence 






















Template Conservation 

  


   
 

 



 
  
Template Sequence  ITRQEIGQIVGCSRETVGRILKM
Template Known Secondary structure 

T

Template Predicted Secondary structure 




Template SS confidence 






















   167..170.........180.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions