Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF88
Confidence99.83%DateThu Jan 5 11:31:46 GMT 2012
Rank9Aligned Residues148
% Identity19%Templated1asua_
SCOP infoRibonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230.........240 .........250.........260.........270.........280.........
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Query Sequence  VNGTPIHERSRNIDNRRSLGHWEGDLVS. . . GTKNSHIATLVDRKSRYTIIVRLRGKDSVSVNQALTDKFLSLPSELRKS
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Template Sequence  PLREPRGLGPLQI. . . . . . . . WQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQHGRVTSVAAQHHWATAIAVL. . GRPKA
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SSSTTS


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GGGTTS
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   48.50.........60 .........70.........80.........90.........100.........110.. .....
 
   290.........300 .........310.........320.........330......... 340.........350.........
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Query Sequence  LTWDRGMELAR. . HLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPK. . . . . . . . KTCLAQYTQHELDLVAAQLN
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Template Sequence  IKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDKIRVLAEGDGFMKRIPTSKQGELLAKAMYALN
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   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   360.........370.
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Query Sequence  NRPRKTLKFKTP
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Template Sequence  HFERGENT. KTN
Template Known Secondary structure  S

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   198.200..... ...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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