Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF88
Confidence76.55%DateThu Jan 5 11:31:46 GMT 2012
Rank271Aligned Residues37
% Identity30%Templatec2o3fC_
PDB info PDB header:transcriptionChain: C: PDB Molecule:putative hth-type transcriptional regulator ybbh; PDBTitle: structural genomics, the crystal structure of the n-2 terminal domain of the putative transcriptional regulator3 ybbh from bacillus subtilis subsp. subtilis str. 168.
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70... ......80.........90...
Predicted Secondary structure 




....






Query SS confidence 
















. . . .



















Query Sequence  AHLTLSEREEIRAGLSA. . . . KMSIRAIATALNRSPSTISR
Query Conservation    

  

  
  
   ....
 
 
 

  

   


 
Alig confidence 
















....



















Template Conservation    

  
  

 

         

  

    

 


 
Template Sequence  XHLPPSERKLADYILAHPHAIESTVNEISALANSSDAAVIR
Template Known Secondary structure 







TT

T

Template Predicted Secondary structure 







Template SS confidence 








































   12.......20.........30.........40.........50..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions