Job Description P0CF88 Confidence 80.77% Date Thu Jan 5 11:31:46 GMT 2012 Rank 228 Aligned Residues 69 % Identity 16% Template c2l0kA_ PDB info PDB header:transcription Chain: A: PDB Molecule:stage iii sporulation protein d; PDBTitle: nmr solution structure of a transcription factor spoiiid in complex2 with dna Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	R	T	F	T	A	E	E	K	A	S	V	F	E	L	W	K	N	G	T	G	F	S	E	I	A	N	I	L	G	S	K	P	G	T	I	F	T	M	L	R	D	T	G	G	I	K	P	H	E	R	K	R	A	V	A	H	L	T	L	S	E	R	E	E	I	R	A	G	L	S	A	K	M	S	I	R	A	I
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	H	D	Y	I	K	E	R	T	I	K	I	G	K	Y	I	V	E	T	K	K	T	V	R	V	I	A	K	E	F	G	V	S	K	S	T	V	H	K	.	.	.	.	.	.	.	.	.	.	.	D	L	T	E	R	L	P	E	I	N	P	D	L	A	N	E	V	K	E	I	L	D	Y	H	K	S	I	R	H	L
Template Known Secondary structure				T	T																											T	S								.	.	.	.	.	.	.	.	.	.	.			T	T																							T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions