Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF88
Confidence70.81%DateThu Jan 5 11:31:46 GMT 2012
Rank363Aligned Residues41
% Identity17%Templatec2dmsA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:homeobox protein otx2; PDBTitle: solution structure of the homeobox domain of homeobox2 protein otx2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20. ........30.........40.
Predicted Secondary structure 








.....



Query SS confidence 




















. . . . .



















Query Sequence  MRRTFTAEEKASVFELWKNGT. . . . . GFSEIANILGSKPGTIFTML
Query Conservation   
   
 
           
 .....     
   

       
 
Alig confidence 




















.....



















Template Conservation   
  

  

  

  
  
  
    
  

  


   

  

Template Sequence  ERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWF
Template Known Secondary structure 

SS


SS

TT

Template Predicted Secondary structure 














Template SS confidence 













































   10.........20.........30.........40.........50.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions