Job Description P0CF88 Confidence 94.60% Date Thu Jan 5 11:31:46 GMT 2012 Rank 54 Aligned Residues 57 % Identity 16% Template c1zvvA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:glucose-resistance amylase regulator; PDBTitle: crystal structure of a ccpa-crh-dna complex Resolution 2.98 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	F	S	E	I	A	N	I	L	G	S	K	P	G	T	I	F	T	M	L	R	D	T	G	G	I	K	P	H	E	R	K	R	A	V	A	H	L	T	L	S	E	R	E	E	I	R	A	G	L	S	A	K	M	S	I	R	A	I	A	T	A	L	N	R	S	P	S	T	I	S	R	E	V	Q	R	N	R
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	I	Y	D	V	A	R	E	A	S	V	S	M	A	T	V	S	R	V	V	N	G	N	P	N	V	.	.	.	.	.	.	.	.	.	.	.	.	K	P	S	T	R	K	K	V	L	.	.	.	.	.	.	.	.	.	.	E	T	I	E	R	L	G	Y	R	P	N	A	V	A	R	G	L	A	S	K	K
Template Known Secondary structure		S		S							T	T	S											T		S		S	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.							T													T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.													30	.	.	.	.	.	.	.	.											.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions