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Job DescriptionP0CF88
Confidence97.44%DateThu Jan 5 11:31:46 GMT 2012
Rank26Aligned Residues98
% Identity21%Templatec1hlvA_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20 .........30.........40... ......50.........60.........70
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Query Sequence  RRTFTAEEKASVFELWKNG. . TGFSEIANILGSKPGTIFTMLRD. . . . . . . . . TGGIKPHERKRAVAHLTLSEREEIRAG
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Template Sequence  RRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSPYDKLEGLLIAW
Template Known Secondary structure  S




TTS
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TGGGGGT






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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   71..... ...80.... .....90.........
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Query Sequence  LSAKMS. . . . . . . . . IRAIATAL. . . . . . . . . NRSPSTISREVQRNR
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Template Sequence  FQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRRRS
Template Known Secondary structure  GGGT



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   85....90.........100.........110.........120.........130.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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