Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7L8
Confidence79.99%DateThu Jan 5 11:05:52 GMT 2012
Rank14Aligned Residues52
% Identity13%Templatec2nn6I_
PDB info PDB header:hydrolase/transferaseChain: I: PDB Molecule:3'-5' exoribonuclease csl4 homolog; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40
Resolution3.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 
























Query SS confidence 























































Query Sequence  SVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE
Query Conservation   
  
 








 


 

  





 
   
 
 
       

 
 
 

Alig confidence 











..










.

















.










Template Conservation   
 


 
    ..
   
 
 
  . 
 
 

  
 
      .    



   
Template Sequence  YCIPGERLCNLE. . EGSPGSGTYTR. HGYIFSSLAGCLMKSSEN. GALPVVSVVRE
Template Known Secondary structure 


TT
TT..T


SSS
.TT

S
S
B


B
T.TSSB
.
B

S
Template Predicted Secondary structure 









..




.




.



Template SS confidence 























































   7..10........ .20......... 30.........40....... ..50........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions