Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7L8
Confidence67.11%DateThu Jan 5 11:05:52 GMT 2012
Rank15Aligned Residues46
% Identity17%Templatec2ba0A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:archeal exosome rna binding protein rrp4; PDBTitle: archaeal exosome core
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80....
Predicted Secondary structure 























Query SS confidence 























































Query Sequence  ESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEA
Query Conservation 
 
  
 








 


 

  





 
   
 
 
       

 
 
 
Alig confidence 










...











.
















......





Template Conservation   





 
  ...     
 
 
  . 
 
 

  
       ...... 
 
  
Template Sequence  KIVLPGDLLST. . . NPRAAGYGTYVE. GGKVYAKIIGLFDQTET. . . . . . HVRVIP
Template Known Secondary structure 

TT
S...
TTSB
TT.TT
SS
SS......
Template Predicted Secondary structure 






...





.



......
Template SS confidence 























































   3......10... ......20..... ....30.........40.. ......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions