Job Description P76041 Confidence 29.70% Date Thu Jan 5 12:17:40 GMT 2012 Rank 269 Aligned Residues 105 % Identity 11% Template d1kwga2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.60

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.													.	.	.	.	.
Query SS confidence																																																.	.													.	.	.	.	.
Query Sequence		P	T	F	N	Q	F	Y	H	Q	W	L	Q	S	I	F	S	H	V	H	L	L	P	F	Y	P	W	S	S	D	D	G	F	S	V	I	D	Y	H	Q	V	A	S	E	A	G	E	.	.	W	Q	D	I	Q	Q	L	G	E	C	S	H	.	.	.	.	.	L	M	F	D	F	V	C	N	H	M	S	A	K	S	E
Query Conservation																																																.	.													.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.												.	.													.	.	.	.	.						.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Sequence		E	R	W	K	E	D	A	R	R	M	R	E	A	G	L	S	H	V	R	I	G	E	F	.	.	.	.	.	.	.	.	.	.	.	.	A	W	A	L	L	E	P	E	P	G	R	L	E	W	G	W	L	D	E	A	I	A	T	L	A	A	E	G	L	K	V	V	L	G	T	.	.	.	P	T	A	T	P	P	K
Template Known Secondary structure															T								T	T	.	.	.	.	.	.	.	.	.	.	.	.							S	B	T	T	B															T	T	T								.	.	.	S	T	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.													.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	K	N	Y	L	Q	Q	H	P	G	F	E	D	F	F	I	A	V	D	P	Q	T	D	L	S	A	V	T	R	P	R	A	L	P	L	L	T	P	F	Q	M	R	D	H	S	T	R	H	L	W	T	T	F	S	D	D	Q	I	D	L	N	Y	R	S	P	E	V	L	L	A	M	V	D	V	L	L	C	Y	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	L	V	D	R	Y	P	E	I	L	P	V	D	R	E	G	R	R	R	R	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	R	H	Y	C	F	S	S	P	V	Y	R	E	E	A	R	R	I	V	T	L	L	A
Template Known Secondary structure								G	G	G	S		B		T	T	S		B			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																																			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		220
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		125

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions