Job Description P76041 Confidence 100.00% Date Thu Jan 5 12:17:40 GMT 2012 Rank 105 Aligned Residues 195 % Identity 21% Template d1iv8a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.			.	.
Predicted Secondary structure																															.	.																																.	.	.	.	.										.	.
Query SS confidence																															.	.																																.	.	.	.	.										.	.
Query Sequence		P	L	P	T	F	N	Q	F	Y	H	Q	W	L	Q	S	I	F	S	H	V	H	L	L	P	F	Y	P	W	S	.	.	S	D	D	G	F	S	V	I	D	Y	H	Q	V	A	S	E	A	G	E	W	Q	D	I	Q	Q	L	G	E	C	S	H	.	.	.	.	.	L	M	F	D	F	V	C	N	H	.	.	M	S
Query Conservation																															.	.																																.	.	.	.	.										.	.
Alig confidence														.																	.	.																																.	.	.	.	.										.	.
Template Conservation														.
Template Sequence		N	F	G	D	V	I	D	N	L	W	Y	F	.	D	L	G	V	S	H	L	Y	L	S	P	V	L	M	A	S	P	G	S	N	H	G	Y	D	V	I	D	H	S	R	I	N	D	E	L	G	G	E	K	E	Y	R	R	L	I	E	T	A	H	T	I	G	L	G	I	I	Q	D	I	V	P	N	H	M	A	V	N
Template Known Secondary structure									T	T	T	T		.																	T	T		S	S			S									T	T	T	T															T	T										S
Template Predicted Secondary structure														.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	S	E	W	F	K	N	Y	L	Q	Q	H	P	G	F	E	D	F	F	I	A	V	D	P	Q	T	D	L	S	A	V	T	R	P	R	A	L	P	.	.	.	L	L	T	P	F	Q	M	R	D	H	S	T	R	H	L	W	T	T	F	S	D	D	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		S	L	N	W	R	L	M	D	V	L	M	.	.	G	S	Y	Y	T	Y	F	D	F	F	P	E	D	D	K	I	R	L	P	I	L	G	E	D	L	D	T	V	I	S	K	G	L	L	K	I	V	K	D	G	D	E	Y	F	L	E	Y	F	K	W	K	L	P	L	T	E	V	G	N	D	I	Y	D	T	L	Q	K
Template Known Secondary structure		T	T										.	.				G	G	G	B		B		T	T		S	S							S	S								T	T								S	S							T	T						S				S	S						T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
												199	200	.	.	.										.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	D	L	N	Y	R	.	.	.	.	.	.	.	.	.	S	P	E	V	L	L	A	M	V	D	V	L	L	C	Y	L	A	K	G	A	E	Y	V	R	L	D	A	V	G	F	M	W	K	E	P	G	T	S	C	I	H	L	E	K	T	H	L	I	I	K	L	L	R	S	I	I
Query Conservation		.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	Y	T	L	M	S	W	K	N	P	P	S	Y	R	R	F	F	D	V	N	T	L	I	G	V	N	V	E	D	H	V	F	Q	E	S	H	S	I	L	D	L	D	V	D	G	Y	R	I	D	H	I	D	G	L	Y	D	.	.	.	.	.	.	.	.	.	.	.	P	E	K	Y	I	N	D	L	R	S	I	I
Template Known Secondary structure		S	S						T	T	S			S	B				T	T							B											T			T	T	S			S					T	T	G	G	G		S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.												.	.	.	.	.	.	240	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	V	A	P	G	T	V	I	I	T	E	T	N	V	P	H	K	D
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		K	N	.	.	.	.	.	I	I	I	V	E	K	I	L	G	F	Q	E
Template Known Secondary structure				.	.	.	.	.										T	T
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		248	.						250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions