Job Description P76041 Confidence 99.29% Date Thu Jan 5 12:17:40 GMT 2012 Rank 108 Aligned Residues 247 % Identity 19% Template c3hz3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucansucrase; PDBTitle: lactobacillus reuteri n-terminally truncated glucansucrase2 gtf180(d1025n)-sucrose complex Resolution 2.22 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.											220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																																										.						.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.																																										.						.	.
Query Sequence		D	L	N	Y	R	S	P	E	V	L	L	A	M	V	D	V	L	L	C	Y	L	.	.	.	.	.	.	.	.	.	.	A	K	G	A	E	Y	V	R	L	D	A	V	G	F	M	W	K	E	P	G	T	S	C	I	H	L	E	K	T	H	L	I	I	K	L	L	R	S	I	I	D	.	N	V	A	P	G	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.																																										.						.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.														.						.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	D	N	S	N	P	V	V	Q	A	E	E	L	N	W	L	Y	Y	L	M	N	F	G	T	I	T	G	N	N	P	E	A	N	F	D	G	I	R	V	N	A	V	D	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	D	L	L	S	I	A	R	D	Y	F	N	A	A	Y	N	M	E	Q	S
Template Known Secondary structure					T	T	S																T							S		T	T	S								T	T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.		T																T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030														.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.
								266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure		.	.	.	.	.	.																																																	.	.																		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																	.	.																		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	T	V	I	I	T	E	T	N	V	P	H	K	D	N	I	A	Y	F	G	A	G	D	D	E	A	H	M	V	Y	Q	F	S	L	P	P	L	V	L	H	A	V	Q	K	Q	N	V	E	A	.	.	L	C	A	W	A	Q	N	L	T	L	P	S	S	N	T	T	W	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.																																																	.	.																		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.													.	.	.																																		.	.																		.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		D	A	S	A	N	K	H	I	N	I	L	E	D	W	G	W	D	D	.	.	.	P	A	Y	V	N	K	I	G	N	P	Q	L	T	M	D	D	R	L	R	N	A	I	M	D	T	L	S	G	A	P	D	K	N	Q	A	L	N	K	L	I	T	Q	S	L	V	N	R	A	N	D	N	T	E	N	A	V	I	P	S
Template Known Secondary structure						T	T	S									T	T		.	.	.							T	T		S	S	B														T	S	S		T	T	T				T	T					S	S	S	S			S					S	S		S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		1052	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.				1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340												.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	F	L	A	S	H	D	G	I	.	.	.	.	.	.	.	.	.	.	.	G	L	N	P	L	R	G	L	L	P	E	S	E	I	L	E	L	V	E	A	L	Q	Q	E	G	A	L	V	N	W	K	N	N	P	D	G	T	R	S	P	Y	E	I	N	V	T	Y	M	D	A	L	S	R	R	E	S	S	D	E
Query Conservation												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	F	V	R	A	H	D	S	N	A	Q	D	Q	I	R	Q	A	I	Q	A	A	T	G	K	P	Y	G	E	F	N	L	D	D	E	K	K	G	M	E	A	Y	I	N	D	Q	N	S	T	N	K	K	W	N	L	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S			S	S	T	T	T																T	T																			T	S	S	S		S	S	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1129	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		E	R	C	A	R	F	I	L	A	H	A	I	L	L	S	F	P	.	G	V	P	A	I	Y	I	Q	S	I	L	G	S	R	N	D	Y	A	G	V	E	K	L	G	Y	N	R	A	I	N	R	K	K	Y	H	S	K	E	I	T	R	E	L	N	D	E	A	T	L	R	H	A	V	Y	H	E	L	S	R	L	I	T
Query Conservation																			.
Alig confidence		.	.	.	.	.													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	M	P	S	A	Y	T	I	L	L	T	N	K	D	S	V	P	R	V	Y	Y	G	D	L	Y	Q	D	G	G	Q	Y	M	E	H	K	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	D	T	I	T	N	L	L	K
Template Known Secondary structure		.	.	.	.	.												S	S							G	G	G	T	B		S	S	B	S	T	T		S	B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							1186	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.																														.	.	.	.	.	.	.	.	1230	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510															.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	R	S	H	N	E	F	H	P	D	N	N	F	T	I	D	T	I	N	S	S	V	M	R	I	P	R	S	N	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	C	L	T	G	L	F	N	V	S	K
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.						.
Template Sequence		T	R	V	K	Y	.	.	.	V	A	G	G	Q	.	T	M	S	V	D	K	N	G	I	L	T	N	V	R	F	G	K	G	A	M	N	A	T	D	T	G	T	D	E	T	R	T	E	G	I	G	V	V	I	S	N	N	T	N
Template Known Secondary structure							.	.	.			S			.						T	T	S									T	T		S	S	T	T					T	T	T	T	T											T	T
Template Predicted Secondary structure							.	.	.						.
Template SS confidence
		1232	.	.	.	.				.	.	.	1240	.		.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions