 |
Job Description | P76041 | Confidence | 68.72% | Date | Thu Jan 5 12:17:40 GMT 2012 |
Rank | 201 | Aligned Residues | 54 |
% Identity | 17% | Template | c3aquD_ |
PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:at4g19810; |
PDBTitle: crystal structure of a class v chitinase from arabidopsis thaliana
|
Resolution | 2.01 Å |
|
 |
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | P | E | V | L | L | A | M | V | D | V | L | L | C | Y | L | . |
A | K | G | A | E | Y | V | R | L | D | A | V | G | F | M | W | K | E | P | G | T | S | C | I | H | L | E | K | T | H | L | I | I | K | L | L | R | S | I | I | D | N | V |
Query Conservation |   |
  |
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|
| . |   |   |
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
| . | . | . | . | . |
|
|   |   |   |   |   |   |
| . |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
S | N | P | T | S | R | K | S | F | I | D | S | S | I | R | V | A | R | S | Y | G | F | H | G | L | D | L | D | . |
. |
. |
. |
. |
W | E | Y | P | S | S | A | T | E | . |
M | T | N | F | G | T | L | L | R | E | W | R | S | A | V | V | A | E |
Template Known Secondary structure |   |
T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
| S |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|
|  | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 120 | . | . | . | |
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|