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Job DescriptionP76041
Confidence100.00%DateThu Jan 5 12:17:40 GMT 2012
Rank14Aligned Residues471
% Identity20%Templatec2zidA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dextran glucosidase; PDBTitle: crystal structure of dextran glucosidase e236q complex with2 isomaltotriose
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60 .........70.........80.........90... ......100.........110......
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Query Sequence  KKHWDESDVVLITYADQFHS. . . NDLKPLPTFNQFYHQWLQSIFSHVHLLPFYPWS. SDDGFSVIDYHQVASEAGEWQDI
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Template Sequence  QKHWWHKATVYQIYPKSFMDTNGDGIGDLKGITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADM
Template Known Secondary structure 


GGGG


GGGT

SSSSSS

TTT
S





TTTTSS
S
GGG

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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   117..120.... .....130.........140....... ..150.........160.........170.........180.........190
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Query Sequence  QQLGECSH. . . . . LMFDFVCNHMSAKSEWFKNYLQQ. HPGFEDFFIAVDPQTDLSAVTRPRALPLLTPFQMRDHSTRHLW
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Template Sequence  DNLLTQAKMRGIKIIMDLVVNHTSDEHAWFIEAREHPDSSERDYYIWCDQPNDL. . . . . . ESIFGGSAWQYDDKSDQYYL
Template Known Secondary structure  TTT


SB

TTS
TTSGGGGGB
SS

S
......B
TTSSBSTTTT
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   82.......90.........100.........110.........120.........130..... ....140.........150.....
 
   191........200.........210.........220.........230.........240... ......250.........260.........
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Query Sequence  TTFSDDQIDLNYRSPEVLLAMVDVLLCYLAKGAEYVRLDAVGFMWKEPGTSCI. HLEKTHLIIKLLRSIIDNVAPGTVII
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Template Sequence  HFFSKKQPDLNWENANLRQKIYDMMNFWIDKGIGGFRMDVIDMIGKIPAQHIVSNGPKLHAYLKEMNAASFG. QHDLLTV
Template Known Secondary structure 
SS
TTS
BB
TT
TTT

TTGGGTT
BGGGTB
SS
TTTGG.GS

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   156...160.........170.........180.........190.........200.........210.........220....... ..230....
 
   270.........280....... ..290.........300.........310.........320.........330.........340........
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Query Sequence  TETNVPHKDNIAYFGAGD. DEAHMVYQFSLPPLVLHAVQKQNVEALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGL
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Template Conservation   
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Template Sequence  GQTWGATPEIAKQYSNPVNHELSMVFQFEHIGLQHKPEAPKW. . . . . . . . . . . . . . . . . . . . . . . . . . . . DYVKELNVPA
Template Known Secondary structure 
TT


GGG
S
S

TTGGGGB
TTS
TT............................SB

S

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   235....240.........250.........260.........270...... ...280......
 
   349350.........360.........370.........380.........390.........400.........410.........420........
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Query Sequence  LPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALSRRESSDEERCARFILAHAILLSFPGVPAIYIQSILG
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Template Sequence  LKTIFNKWQTELELGQGWNSLFWNNHDLPRVLSIWG. . . . . . . . . . . NTGKYREKSAKALAILLHLMRGTPYIYQGEEIG
Template Known Secondary structure  S
TTT



S

TTS

S...........
SSTTTSSSTTGGGT
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   287..290.........300.........310.........320.. .......330.........340.........350.....
 
   429430 .........440.... .....450.........460
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Query Sequence  SR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NDYAGVEKLGYNRA. INRKKYHSKEITRELN
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Template Conservation                                                
  
 
       
                    
Template Sequence  MTNYPFKDLNELDDIESLNYAKEAFTNGKSMETIMDSIRMIGRDNARTPMQWDASQNAGFSTADKTWLPVNPNYKDINVQ
Template Known Secondary structure 






SGGG


TTT


GGGG
S




SSGGGGS

SSS
SS


GGGGTS
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   356...360.........370.........380.........390.........400.........410.........420.........430.....
 
   461........470.........480.........490.........500.........510.........520.........530.........540
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Query Sequence  DEATLRHAVYHELSRLITLRRSHNEFHPDNNFTIDTINSSVMRIPRSNADGNCLTGLFNVSKNIQHVNITNLHGRDLISE
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Template Sequence  AALKNSNSIFYTYQQLIQLRKENDWLVDADFELL. PTADKVFAYLRKV. REERYLIVVNVSDQEEVLEIDVDKQETLISN
Template Known Secondary structure  STTS
T

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TT.TT
SSS






S
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   436...440.........450.........460......... 470.........480.. .......490.........500.........510...
 
   541.. ......550.........
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Query Sequence  VDI. . LGNEITLRPWQVMWIK
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Template Sequence  TNESAALANHKLQPWDAFCIK
Template Known Secondary structure  S
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   514.....520.........530....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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