Job Description P76041 Confidence 64.03% Date Thu Jan 5 12:17:40 GMT 2012 Rank 207 Aligned Residues 154 % Identity 8% Template c2x2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:alpha-1,4-glucan lyase isozyme 1; PDBTitle: crystal structure of the gracilariopsis lemaneiformis alpha-2 1,4-glucan lyase with acarbose Resolution 2.60 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.	.	.	.			.	130	.	.	.	.
Predicted Secondary structure																											.																																				.	.	.	.	.	.	.					.	.
Query SS confidence																											.																																				.	.	.	.	.	.	.					.	.
Query Sequence		P	L	P	T	F	N	Q	F	Y	H	Q	W	L	Q	S	I	F	S	H	V	H	L	L	P	F	.	Y	P	W	S	S	D	D	G	F	S	V	I	D	Y	H	Q	V	A	S	E	A	G	E	W	Q	D	I	Q	Q	L	G	E	C	S	H	.	.	.	.	.	.	.	L	M	F	D	.	.	F	V	C	N	H	M
Query Conservation																											.																																				.	.	.	.	.	.	.					.	.
Alig confidence														.													.																																				.	.	.	.	.	.	.					.	.
Template Conservation														.
Template Sequence		S	V	E	E	I	V	E	G	Y	Q	N	N	.	N	F	P	F	E	G	L	A	V	D	V	D	M	Q	D	N	L	R	V	F	T	T	K	G	E	F	W	T	A	N	R	V	G	T	G	G	D	P	N	N	R	S	V	F	E	W	A	H	D	K	G	L	V	C	Q	T	N	I	T	C	F	L	R	N	D	N	E
Template Known Secondary structure												T	T	.	T										G	G	G	S	B	T	T	B	T	T				G	G	G	B	T	T	S	S				S			T	T	S		B							T	T	T									S							T
Template Predicted Secondary structure														.
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	K	S	E	W	F	K	N	Y	L	Q	Q	H	P	G	F	E	D	F	F	I	A	V	D	P	Q	T	D	L	S	A	V	T	R	P	R	A	L	P	L	L	T	P	F	Q	M	R	D	H	S	T	R	H	L	W	T	T	F	S	D	D	Q	I	D	L	N	Y	R	S	P	E	V	L	L	A	M	V	D	V
Query Conservation
Alig confidence																.	.	.	.	.	.																																										.	.	.	.	.
Template Conservation																.	.	.	.	.	.																																										.	.	.	.	.
Template Sequence		G	Q	D	Y	E	V	N	Q	T	L	R	E	R	Q	.	.	.	.	.	.	L	Y	T	K	N	D	S	L	T	G	T	D	F	G	M	T	D	D	G	P	S	D	A	Y	I	G	H	L	D	Y	G	G	G	V	E	C	D	A	L	F	P	.	.	.	.	.	D	W	G	R	P	D	V	A	E	W	W	G	N	N
Template Known Secondary structure		T												T	T	.	.	.	.	.	.		B					B	T	T								S	S	S		T	T	S								S	T	T								B	.	.	.	.	.		T	T	S	T	T
Template Predicted Secondary structure																.	.	.	.	.	.																																										.	.	.	.	.
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.							.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.						.	.	.	.	.	530	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	C	Y	L	A	K	G	A	E	Y	V	R	L	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	K	L	F	S	I	G	L	D	F	V	W	Q	D	M
Template Known Secondary structure		T					T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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