Return to main results Retrieve Phyre Job Id

Job DescriptionP76041
Confidence57.07%DateThu Jan 5 12:17:40 GMT 2012
Rank225Aligned Residues73
% Identity11%Templatec2wnwB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:activated by transcription factor ssrb; PDBTitle: the crystal structure of srfj from salmonella typhimurium
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   474.....480.........490... ......500.........510.........520.........530.........540.........550..
Predicted Secondary structure 




.



























Query SS confidence 



















.


























































Query Sequence  SRLITLRRSHNEFHPDNNFT. IDTINSSVMRIPRSNADGNCLTGLFNVSKNIQHVNITNLHGRDLISEVDILGNEITLRP
Query Conservation 
 

 


  


  
    .       
 
  
        


 
 
       
       
          
 
 
Alig confidence 



















.











































..........




Template Conservation    

 
  







  

        
   
   


  


  
         
   
    ..........  


Template Sequence  HSWYGIGHFCRYVRPGARVMLSSSYDNLLEEVGFVNPDGERVLVVYNRDVQERRCRVLDGDKEIA. . . . . . . . . . LTLPP
Template Known Secondary structure  TT

TT
SSTT
TTS

SSS
TT..........
T
Template Predicted Secondary structure 

























..........

Template SS confidence 















































































   365....370.........380.........390.........400.........410.........420......... 430....
 
   553...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  WQVM
Query Conservation 
   
Alig confidence 



Template Conservation   

 
Template Sequence  SGAS
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 



   435...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions